species:   Fugra
pid:       PID0960
parent:    FgmilR-7dps-08
paralog:   
locus:     NC_026474.1:5141324-5141453
matures:   ['UAGUGGAUUAGAUCUUAGAUGAU', 'CUUCUGAGGUCUCAAGCAGUGUG']
srr:       SRR6516245
genome:    /Users/jax/+Genomes/Fungal_genomes/Fugra.GCF_000240135.3_ASM24013v3_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516245.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516245.cram NC_026474.1:5141324-5141453

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

    ************************                                                                          ************************    
GCUGAAGAUAGUGGAUUAGAUCUUAGAUGAUUAUAUGAUAUGAUAUUAUGUGUGCCUUGUACUUGCAUUUGAGAUAAACAGGGCAACCCACUUCCUCCCCUCUUCUGAGGUCUCAAGCAGUGUGUGUAGC
((((.(.(((.((....((((((((((.((.(((((((((...)))))))))((((((((.(((......)))....))))))))...............)).))))))))))....)).))).).))))
--------UAGUGGAUUAGAUCUUAGAUGAU--------------------------------------------------------------------------------------------------- l=23 a=0 c
-----------------------------------------------------------------------------------------------------CUUCUGAGGUCUCAAGCAGUGUG------ l=23 a=0 c*
------GAUAGUGGAUUAGAUCUUAGAU------------------------------------------------------------------------------------------------------ l=22 a=1 ma
--------------------------------------------------------------------------------------------------------CUGAGGUCUCAAGCAGUGUGUG---- l=22 a=0 ma*

------GAUAGUGGAUUAGAUCUUAGAU------------------------------------------------------------------------------------------------------ l=22 a=1 (ma)

mb-01011
ax-1001111
ku-01
ss-110111101110
fn-011
